- Systems biology/biotechnology/bioinformatics
- Process Digital Twins
- Microbiome engineering
- Drug & disease modeling and control
- Health/energy/environmental policy modeling
Journal Articles
(2024)
Kinetics-based inference of environment-dependent microbial interactions and their dynamic variation.
MSYSTEMS.
9,
4
(2024)
Driving towards digital biomanufacturing by CHO genome-scale models.
TRENDS IN BIOTECHNOLOGY.
42,
5
(2024)
Evaluating oleaginous yeasts for enhanced microbial lipid production using sweetwater as a sustainable feedstock.
MICROBIAL CELL FACTORIES.
23,
(2024)
Exploring metabolic effects of dipeptide feed media on CHO cell cultures by in silico model-guided flux analysis.
APPLIED MICROBIOLOGY AND BIOTECHNOLOGY.
108,
(2023)
Data-driven prediction models for forecasting multi-step ahead profiles of mammalian cell culture towards bioprocess digital twins.
BIOTECHNOLOGY AND BIOENGINEERING.
120,
9
(2023)
Debottlenecking and reformulating feed media for improved CHO cell growth and titer by data-driven and model-guided analyses.
BIOTECHNOLOGY JOURNAL.
18,
(2023)
Mitigating biomass composition uncertainties in flux balance analysis using ensemble representations.
COMPUTATIONAL AND STRUCTURAL BIOTECHNOLOGY JOURNAL.
21,
-
(2023)
Genome-scale metabolic modeling and <i>in silico</i> analysis of opportunistic skin pathogen <i>Cutibacterium acnes</i>.
FRONTIERS IN CELLULAR AND INFECTION MICROBIOLOGY.
13,
-
(2023)
Enhanced cell growth, production, and mAb quality produced in Chinese hamster ovary-K1 cells by supplementing polyamine in the media.
APPLIED MICROBIOLOGY AND BIOTECHNOLOGY.
107,
9
(2023)
Liver's influence on the brain through the action of bile acids.
FRONTIERS IN NEUROSCIENCE.
17,
(2022)
Systematic evaluation of genome-wide metabolic landscapes in lactic acid bacteria reveals diet- and strain-specific probiotic idiosyncrasies.
CELL REPORTS.
41,
10
(2022)
Data-driven and model-guided systematic framework for media development in CHO cell culture.
METABOLIC ENGINEERING.
73,
1
(2022)
Editorial: Heterologous Protein Expression and Production Platforms: The How, Now and Wow of It, Volume II.
FRONTIERS IN BIOENGINEERING AND BIOTECHNOLOGY.
10,
(2022)
Combined multivariate statistical and flux balance analyses uncover media bottlenecks to the growth and productivity of Chinese hamster ovary cell cultures.
BIOTECHNOLOGY AND BIOENGINEERING.
119,
7
(2022)
Systems Biology of Gut Microbiota-Human Receptor Interactions: Toward Anti-inflammatory Probiotics.
FRONTIERS IN MICROBIOLOGY.
13,
(2021)
Editorial: Predictive Modeling of Human Microbiota and Their Role in Health and Disease.
FRONTIERS IN MICROBIOLOGY.
12,
1
(2021)
Multi-omics profiling of a CHO cell culture system unravels the effect of culture pH on cell growth, antibody titer, and product quality.
BIOTECHNOLOGY AND BIOENGINEERING.
118,
11
(2021)
Bioprocess digital twins of mammalian cell culture for advanced biomanufacturing.
CURRENT OPINION IN CHEMICAL ENGINEERING.
33,
(2021)
Combination of red and blue light induces anthocyanin and other secondary metabolite biosynthesis pathways in an age-dependent manner in Batavia lettuce.
PLANT SCIENCE.
310,
Conference Paper
(2022)
Characterizing basal and feed media effects on mammalian cell cultures by systems engineering approaches.
Part of special issue:13th IFAC Symposium on Dynamics and Control of Process Systems.
KOREA, REPUBLIC OF